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CEFAS24-126 RFQ for Genotype-by-sequencing approach of Colossal Squid

Reference ocds-b5fd17-2dfc328e-f804-47ac-a8aa-a11d5663bb91 · Cefas

Closed. Submission deadline: 30 September 2024. Estimated value: £40,000.

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Amounts and figures

£40,000
Estimated value

Description

Cefas is currently undertaking a population genetics assessment on colossal squid. Cefas is seeking a supplier to sequence rare samples using a genotype-by-sequencing (GBS) approach. Tissue samples (mainly tentacles) have been collected from various regions across the globe. The samples themselves are in two types of preservative, depending on the institutes which collected the samples; ethanol and formaldehyde. Cefas is aware that there is a multitude of genotype-by-sequencing approaches, some using propriety technology and some not. We are seeking applications which offer a GBS approach that maximises SNP identification and coverage to allow Cefas explore population structure. Additionally, suppliers must have a comprehensive DNA extraction step to compensate for varying levels of sample preservation. Due to the scarcity of these animals, we have 33 samples but we expect samples to be run in duplicate at an average coverage of x30 depth for each duplicated sample. Requirement: To aid with the above project, Cefas require DNA extraction of squid tissues in ethanol (31) and formaldehyde (2). Assessment of DNA quantity and quality (see 'Deliverables' sections) will need to…

Official publications

MediumReferenceDate
FTS 0e5cfb99-3c24-40dc-a1e3-90aa7a87854a-784893 12 September 2024
Contracts Finder 0e5cfb99-3c24-40dc-a1e3-90aa7a87854a-784893 12 September 2024

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Frequently asked questions

What is the deadline to bid for this tender?
The submission deadline is 30 September 2024, 12:00. Check the official source, as dates can be modified.
What is the estimated value of this tender?
The estimated value published by the buyer is £40,000.
Who is the buyer of this tender?
The contracting authority is Cefas (United Kingdom).
How can I bid for public tenders in the United Kingdom?
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Data collected from official public procurement sources. Amounts as published by the buyer.