Development of an LLM-augmented bioinformatics workflow for transcriptomics-based chemical grouping in support of EFSA risk assessment
European Food Safety Authority
Prior notice. Estimated value: €500,000.
Interested in tenders like this? Get the next tenders like this one published in the European Union by email. Free, no card needed.
Amounts and figures
Description
Design, implementation and validation of an end-to-end, LLM-augmented bioinformatics workflow that, given a chemical substance, automatically discovers, downloads and reanalyses transcriptomics datasets from selected public repositories. The system will harmonise key metadata, generate standardised transcriptomic signatures, cluster chemicals based on inferred mode of action, and compare the resulting groups with existing EFSA Cumulative Assessment Groups (CAGs) to support regulatory risk assessment. All code developed will be open source.
Official publications
| Medium | Reference | Date |
|---|---|---|
| TED | 00776813-2025 | 24 November 2025 |
| OJS | 226/2025 | 24 November 2025 |
Other tenders from European Food Safety Authority
- Preparatory support on bioinformatics for the evaluation of the risk assessment of GMO dossiers Published: 15 October 2026
- Support to detection of EU plant pests: trapping (LOT 1), eDNA (LOT 2) and remote sensing imagery (LOT 3) Published: 8 October 2026
- Provision of a comprehensive publishing service for EFSA’s scientific outputs Published: 5 October 2026
- Support to detection of EU plant pests: trapping (LOT 1), eDNA (LOT 2) and remote sensing imagery (LOT 3) Published: 1 October 2026
- Technical support for the development of the Animal Welfare Data Hub Published: 14 September 2026
- Servizio di mensa, bar, catering e fornitura di erogatori d’acqua Published: 7 September 2026
- Servizio navetta nel rispetto dell'ambiente Published: 7 September 2026
- Support to detection of EU plant pests: trapping (LOT 1), eDNA (LOT 2) and remote sensing imagery (LOT 3) Published: 4 September 2026
- Event, meeting & hospitality management Published: 28 August 2026
- SPOC, IT RUN and IT Development, Managed and Corporate Services Published: 25 August 2026
Previous and next from European Food Safety Authority
- Developing provisions for guidance on New Approach Methodologies (NAMs) data integration and implementing hypothesis-driven Next Generation…
- Integration of New Approach Methodologies in Chemical Risk Assessment: case studies addressing nanoplastics in food (NAMs4Nanoplastics)
- Monitoring of Avian Influenza and other animal health diseases
- Implementation of Pest survey toolkit in EFSA Azure Cloud datalake architecture
- Support to detection of EU plant pests: trapping (LOT 1), eDNA (LOT 2) and remote sensing imagery (LOT 3)
- VIDEO/AUDIO/MAINTENANCE/SERVICES AND SMALL ACQUISITIONS FOR MEETING ROOMS
Similar open tenders
- CAMS2_54b Co-design of GHG policy services in support of EU Member States and Copernicus Participating countr…
- Request for Tenders dated 01/10/2026 for the provision of maintenance services for Met Eireann’s environmenta…
- CMNHS246/2026- Establishment of a Single Operator Framework Agreement For Qualified Person (QP) Services to C…
- Request for Tender for the Provision of a Shared Island Media Fund Talent Development and Content Development…
- Ship design and safety assessment of nuclear fission technologies for maritime applications
- Contract for Service to develop a nature restoration framework, ensuring complementarity with existing land u…
Frequently asked questions
- What is the estimated value of this tender?
- The estimated value published by the buyer is €500,000.
- Who is the buyer of this tender?
- The contracting authority is European Food Safety Authority (European Union).
- How can I bid for public tenders in the European Union?
- Bids are submitted through the official public procurement portal in the European Union. El Vínculo helps you find tenders and analyse their documents; submission always happens at the official source.
How can I find out about similar tenders when they are published?
Create an account at el-vinculo.com and we give you a free month and set up your company's filters — contract type, CPV codes, value and territory — so you are the first to know when new tenders like this one come out in the European Union. We email you as soon as one matching your profile is published, with the whole deadline ahead to prepare the bid.
Create a free account and receive new public tenders published in the European Union that match your business, every day.