Development and validation of a species-specific environmental DNA (eDNA) assay for American mink (Neovison vison)
Reference ocds-b5fd17-939d95c9-14f2-4657-9094-d1c1384288ca · Natural England
Contract modification. Estimated value: £25,000.
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Amounts and figures
Description
The development of a dPCR assay for American mink (Neovison vison). 1. qPCR validation a. The successful contractor will evaluate four existing assays for American mink that target either the COI gene (Pugh 2022), cyt-b gene (Di Girolamo 2022) or ND2 gene (Takaba and others 2024) using the validation scale for single species eDNA assays (Thalinger and others 2021). b. Areas for assay improvement should be identified, and further in silico and in vitro testing conducted using qPCR to ensure at least one assay reaches Level 3 minimum on the validation scale (Thalinger and others 2021). The assay(s) should be able to achieve a R-squared value ≥0.990 and efficiency of 90-110%. c. If these validation criteria are not met, the successful contractor must design a new assay that does meet the validation criteria. d. A confidence assessment should be undertaken for the best-performing assay following the requirements set out in NECR359 "A framework for assessing confidence in environmental DNA qPCR assays and results" (K.J. Harper and others 2021). This framework (also known as COASTER) requires a standardised data input, as well as user-defined settings, and can be accessed throu…
Official publications
| Medium | Reference | Date |
|---|---|---|
| FTS | 52e42ac0-db85-4545-a3db-0099eb914a42-780304 | 27 August 2024 |
| Contracts Finder | 52e42ac0-db85-4545-a3db-0099eb914a42-780304 | 27 August 2024 |
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Frequently asked questions
- What is the deadline to bid for this tender?
- The submission deadline is 5 September 2024, 12:00. Check the official source, as dates can be modified.
- What is the estimated value of this tender?
- The estimated value published by the buyer is £25,000.
- Who is the buyer of this tender?
- The contracting authority is Natural England (United Kingdom).
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